Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
DNase-seq
7
WGBS
5
GRO-seq
3
ATAC-seq
1
FAIRE-seq
Assay category
70
DNA binding
Transcription
7
DNA methylation
4
DNA accessibility
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
406
November, 2017
317
August, 2017
274
October, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
80
April, 2019
78
November, 2018
74
October, 2018
49
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
40
May, 2024
35
December, 2018
31
June, 2019
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
11
May, 2023
11
November, 2020
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
0
April, 2018
Available data
83
fastq
79
bigWig
78
bam
64
bed narrowPeak
64
bigBed narrowPeak
7
bed bedMethyl
7
bigBed bedMethyl
Organism
86
Homo sapiens
Biosample type
62
cell line
19
tissue
4
in vitro differentiated cells
1
stem cell
Organ
50
liver
16
blood
16
bodily fluid
8
spleen
5
pancreas
1
adipose tissue
1
connective tissue
1
embryo
1
musculature of body
Project
86
AMP
Genome assembly (visualization)
70
GRCh38
65
hg19
5
hg18
Lab
86
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_slims!
Transcription
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
86 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
GRO-seq
ATAC-seq
FAIRE-seq
cell line
HepG2
45
1
GM12878
15
1
tissue
spleen
6
2
liver
4
pancreas
2
1
body of pancreas
2
adipose tissue
1
+ See 1 more…
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
See all biosamples
Download