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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
WGBS
1
ATAC-seq
DNase-seq
1
RRBS
1
pCHi-C
Assay category
20
DNA binding
3
DNA methylation
1
DNA accessibility
Transcription
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
8
November, 2018
7
December, 2018
7
January, 2019
1
July, 2019
1
March, 2020
1
October, 2017
Available data
23
bam
23
fastq
15
bigWig
13
bed narrowPeak
12
bigBed narrowPeak
3
bed bedMethyl
3
bigBed bedMethyl
1
tsv
Organism
25
Homo sapiens
Biosample type
25
tissue
Organ
592
liver
459
pancreas
304
epithelium
230
brain
197
heart
194
connective tissue
158
vasculature
154
blood vessel
148
kidney
97
bone element
88
adipose tissue
79
artery
79
limb
69
blood
69
bodily fluid
54
musculature of body
38
eye
36
nerve
24
spleen
23
embryo
20
vein
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
25
AMP
Genome assembly (visualization)
15
GRCh38
14
hg19
Lab
25
AMP-T2D consortium
assay_slims!
Transcription
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
WGBS
ATAC-seq
RRBS
pCHi-C
tissue
spleen
20
2
1
1
pericardium
1
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