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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
Assay category
94
DNA binding
Transcription
Target of assay
42
transcription factor
31
histone
31
histone modification
21
control
16
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
406
November, 2017
262
October, 2019
223
August, 2017
214
June, 2019
197
May, 2021
151
May, 2020
146
February, 2021
134
August, 2021
118
May, 2019
97
February, 2023
94
December, 2017
80
April, 2019
80
November, 2018
42
May, 2022
40
May, 2024
34
December, 2018
33
July, 2019
31
March, 2020
25
January, 2019
24
February, 2018
23
October, 2018
18
October, 2017
11
May, 2023
10
April, 2020
8
January, 2018
8
January, 2021
6
November, 2019
2
December, 2019
2
November, 2020
1
August, 2018
1
October, 2022
0
September, 2020
Available data
94
bam
94
fastq
72
bed narrowPeak
72
bigWig
50
bigBed narrowPeak
15
bed bed3+
Organism
94
Homo sapiens
Biosample type
48
tissue
43
in vitro differentiated cells
3
stem cell
Organ
63
liver
22
epithelium
13
embryo
pancreas
Project
94
AMP
Genome assembly (visualization)
77
GRCh38
77
hg19
Lab
94
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
assay_slims!
Transcription
assay_title!
Hi-C
organ_slims!
pancreas
BIOSAMPLE
ASSAY
94 results
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Clear Filters
ChIP-seq
tissue
liver
38
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
stem cell
hESC
3
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