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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
snATAC-seq
11
ATAC-seq
3
CRISPR genome editing followed by DNA sequencing
3
ChIP-seq
HiChIP
Assay category
Transcription
29
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
May, 2021
16
February, 2023
16
January, 2021
3
March, 2020
Available data
3
bam
3
bed narrowPeak
3
bigWig
Organism
35
Homo sapiens
Biosample type
23
tissue
8
primary cell
4
cell line
Organ
24
pancreas
8
blood
8
bodily fluid
1
epithelium
Project
2596
AMP
147
HPAP
35
T1D
10
LungMap
1
ITG
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
32
Kyle Gaulton, UCSD
3
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
Transcription
assay_title!
HiChIP
assembly!
hg18
month_released!
May, 2021
BIOSAMPLE
ASSAY
35 results
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snATAC-seq
ATAC-seq
CRISPR genome editing followed by DNA sequencing
ChIP-seq
tissue
islet of Langerhans
6
11
2
pancreas
4
primary cell
peripheral blood mononuclear cell
8
cell line
EndoC_BH1
3
1
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