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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ATAC-seq
2
Capture-C
Assay category
6
DNA accessibility
Date released
4
August, 2021
3
February, 2023
1
October, 2017
Available data
6
bigWig
4
bed narrowPeak
3
bed bedgraph
3
txt
2
bed bed3+
1
bed broadPeak
1
fastq
Organism
8
Homo sapiens
Biosample type
7
in vitro differentiated cells
1
tissue
Organ
4
connective tissue
1
pancreas
Project
8
AMP
Genome assembly (visualization)
8
hg19
1
GRCh38
Lab
2218
AMP-T2D consortium
226
Kyle Gaulton, UCSD
147
Klaus Kaestner, Upenn
82
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
28
Bing Ren, UCSD
20
Karen Mohlke, UNC
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
assay_slims!
Transcription
assay_title!
HiChIP
month_released!
June, 2019
BIOSAMPLE
ASSAY
8 results
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ATAC-seq
Capture-C
in vitro differentiated cells
adipocyte
1
1
osteoblast
1
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
tissue
islet of Langerhans
1
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