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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
163
DNase-seq
64
ATAC-seq
6
snATAC-seq
2
Hi-C
1
RNA microarray
Assay category
233
DNA accessibility
Transcription
2
3D chromatin structure
Date released
220
October, 2019
195
August, 2017
163
June, 2019
115
May, 2019
95
February, 2021
82
November, 2017
81
February, 2023
80
April, 2019
74
October, 2018
73
August, 2021
50
May, 2020
48
December, 2017
40
May, 2024
39
May, 2022
31
March, 2020
30
July, 2019
26
November, 2018
23
October, 2017
21
November, 2019
11
May, 2023
10
April, 2020
8
January, 2021
7
December, 2018
7
January, 2019
6
September, 2017
5
March, 2019
4
November, 2020
2
December, 2019
2
January, 2018
1
August, 2022
1
May, 2021
Available data
227
bed narrowPeak
163
bam
163
bed bed3+
163
bed broadPeak
163
bigBed broadPeak
163
bigBed narrowPeak
163
bigWig
64
xls
1
bedpe bed3+
1
hic
Organism
235
Homo sapiens
Biosample type
236
tissue
59
primary cell
35
in vitro differentiated cells
27
cell line
Organ
139
kidney
32
limb
32
musculature of body
27
heart
25
brain
18
ureter
5
pancreas
3
blood vessel
3
eye
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
Project
236
AMP
Genome assembly (visualization)
227
GRCh38
148
hg19
Lab
164
AMP-T2D consortium
71
Katalin Susztak, Upenn
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
assay_slims!
Transcription
assay_title!
MPRA
BIOSAMPLE
ASSAY
236 results
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DNase-seq
ATAC-seq
snATAC-seq
Hi-C
RNA microarray
tissue
kidney
13
64
6
1
heart
18
muscle of arm
17
muscle of leg
13
brain
12
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