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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
4
ChIP-seq
2
Capture-C
Assay category
41
DNA methylation
39
DNA accessibility
4
DNA binding
Target of assay
3
histone
3
histone modification
2
narrow histone mark
1
broad histone mark
1
control
Date released
80
May, 2022
35
September, 2018
32
October, 2019
29
August, 2017
20
June, 2019
20
May, 2021
19
December, 2017
15
November, 2019
13
February, 2023
8
July, 2019
7
August, 2020
6
August, 2021
6
February, 2021
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
4
March, 2020
3
October, 2022
3
September, 2020
1
December, 2019
Available data
80
zippedFastqFolder
4
bam
4
tagAlign
3
bed bed3+
3
bed narrowPeak
3
bigWig
Organism
86
Homo sapiens
Biosample type
84
primary cell
2
cell line
Organ
101
pancreas
86
epithelium
73
kidney
46
liver
5
connective tissue
1
adipose tissue
1
musculature of body
Project
80
HPAP
6
AMP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
80
Klaus Kaestner, Upenn
6
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
Transcription
assay_title!
MPRA
BIOSAMPLE
ASSAY
86 results
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WGBS
ATAC-seq
ChIP-seq
Capture-C
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
hepatocyte
4
pancreatic acinar cell
4
cell line
EndoC_BH1
2
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