Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
ChIP-seq
13
ATAC-seq
Assay category
Transcription
129
DNA binding
13
DNA accessibility
Target of assay
122
histone
122
histone modification
69
broad histone mark
53
narrow histone mark
4
transcription factor
3
control
Date released
334
November, 2017
210
June, 2019
191
October, 2019
183
August, 2017
128
May, 2021
97
May, 2019
80
November, 2018
72
December, 2017
72
May, 2020
65
April, 2019
46
September, 2018
45
October, 2018
40
May, 2024
32
August, 2021
30
December, 2018
21
January, 2019
20
July, 2019
20
May, 2022
16
February, 2018
14
October, 2017
11
November, 2019
8
January, 2018
7
August, 2020
7
March, 2020
6
February, 2021
5
September, 2017
3
February, 2023
3
September, 2020
1
November, 2020
Available data
145
bed narrowPeak
142
bigWig
119
bam
104
tagAlign
17
fastq
6
bigBed narrowPeak
4
bed broadPeak
Organism
142
Homo sapiens
Biosample type
117
primary cell
14
tissue
10
in vitro differentiated cells
1
cell line
Organ
8
pancreas
7
brain
3
epithelium
1
adipose tissue
1
connective tissue
1
spleen
Project
85
T1D
57
AMP
Genome assembly (visualization)
141
hg19
104
GRCh38
Lab
122
Kyle Gaulton, UCSD
19
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
4
inconsistent ontology term
Audit category:
3
missing controlled_by
assay_slims!
Transcription
assay_title!
MeRIP-seq
BIOSAMPLE
ASSAY
142 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
primary cell
monocyte
84
CD8-positive, alpha-beta T cell
33
tissue
brain
6
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
in vitro differentiated cells
embryonic stem cell
5
cardiomyocytes
3
pancreatic PP cell
2
cell line
EndoC_BH1
1
See all biosamples
Download