Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
4
ChIP-seq
4
DNase-seq
4
pCHi-C
RRBS
Assay category
32
DNA accessibility
Transcription
4
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
control
1
transcription factor
Date released
27
February, 2023
7
October, 2019
6
June, 2019
Available data
33
bed narrowPeak
6
bam
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
40
Homo sapiens
Biosample type
37
tissue
3
primary cell
Organ
488
liver
412
pancreas
287
epithelium
232
brain
213
kidney
205
heart
connective tissue
146
vasculature
142
blood vessel
98
limb
97
bone element
76
musculature of body
74
artery
66
adipose tissue
63
blood
63
bodily fluid
40
eye
27
nerve
20
vein
18
ureter
17
spleen
16
embryo
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
40
AMP
Genome assembly (visualization)
33
hg19
6
GRCh38
Lab
40
AMP-T2D consortium
assay_slims!
Transcription
assay_title!
RRBS
organ_slims!
connective tissue
target.investigated_as!
control
BIOSAMPLE
ASSAY
40 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
pCHi-C
tissue
retina
15
3
pigmented layer of retina
12
islet of Langerhans
1
2
4
primary cell
retinal pigment epithelial cell
2
1
Download