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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
338
ChIP-seq
Assay category
338
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
58
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
241
November, 2017
49
November, 2018
33
December, 2017
11
August, 2021
4
August, 2017
Available data
333
bigWig
329
bed narrowPeak
327
fastq
326
bam
314
bigBed narrowPeak
44
bed broadPeak
44
bigBed broadPeak
3
tar
2
bed bed3+
Organism
338
Homo sapiens
Biosample type
297
cell line
39
tissue
2
in vitro differentiated cells
Organ
338
liver
51
blood
51
bodily fluid
40
connective tissue
19
pancreas
17
adipose tissue
17
heart
10
kidney
9
epithelium
9
vasculature
8
blood vessel
6
spleen
5
artery
3
brain
3
embryo
1
eye
Project
338
AMP
Genome assembly (visualization)
329
hg19
286
GRCh38
Lab
327
AMP-T2D consortium
11
Bing Ren, UCSD
Audit category:
27
inconsistent control
Audit category:
12
missing controlled_by
Audit category:
15
inconsistent control read length
8
inconsistent control run_type
assay_slims!
Transcription
assay_title!
RRBS
organ_slims!
bone element
BIOSAMPLE
ASSAY
338 results
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Clear Filters
ChIP-seq
cell line
HepG2
297
tissue
liver
37
right lobe of liver
2
in vitro differentiated cells
hepatocyte
2
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