Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
36
DNase-seq
14
ATAC-seq
4
Hi-C
WGBS
Assay category
66
DNA binding
50
DNA accessibility
Transcription
4
3D chromatin structure
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
65
October, 2019
32
June, 2019
8
February, 2021
7
May, 2019
4
February, 2023
4
July, 2019
Available data
111
bam
94
bed narrowPeak
86
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
bed bed3
Organism
120
Homo sapiens
Biosample type
120
tissue
Organ
592
liver
416
pancreas
276
epithelium
262
brain
229
kidney
219
heart
197
connective tissue
167
vasculature
161
blood vessel
114
limb
97
bone element
86
musculature of body
84
adipose tissue
83
artery
69
blood
69
bodily fluid
42
eye
38
nerve
23
embryo
23
spleen
22
vein
18
ureter
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
120
AMP
Genome assembly (visualization)
98
hg19
93
GRCh38
Lab
120
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
Transcription
assay_title!
WGBS
whole genome sequencing assay
BIOSAMPLE
ASSAY
120 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
Hi-C
tissue
tibial nerve
35
2
1
tibial artery
23
2
1
muscle of leg
7
13
muscle of arm
17
gastrocnemius medialis
4
+ See 15 more…
See all biosamples
Download