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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
pCHi-C
10
Hi-C
4
ATAC-seq
3
ChIP-seq
Assay category
Transcription
10
3D chromatin structure
4
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
406
November, 2017
322
August, 2017
280
October, 2019
218
June, 2019
200
May, 2021
150
February, 2021
150
May, 2020
140
May, 2022
139
August, 2021
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
46
September, 2018
43
July, 2019
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
17
March, 2020
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2022
1
March, 2023
Available data
10
bedpe bed3+
10
hic
7
bigWig
3
bam
3
bed narrowPeak
2
tsv
Organism
17
Homo sapiens
Biosample type
11
tissue
3
cell line
2
in vitro differentiated cells
1
primary cell
Organ
8
pancreas
4
epithelium
2
blood vessel
2
heart
2
musculature of body
2
vasculature
1
liver
1
vein
Project
14
AMP
3
T1D
Genome assembly (visualization)
17
hg19
3
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
assay_slims!
Transcription
assay_title!
pCHi-C
month_released!
August, 2020
May, 2019
BIOSAMPLE
ASSAY
17 results
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Hi-C
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
2
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
cell line
EndoC_BH1
2
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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