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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ATAC-seq
25
ChIP-seq
pCHi-C
1
DNAme array
Assay category
Transcription
34
DNA accessibility
25
DNA binding
1
DNA methylation
Target of assay
histone
140
histone modification
76
broad histone mark
64
narrow histone mark
16
transcription factor
9
control
5
RNA binding protein
Date released
318
November, 2017
199
June, 2019
150
February, 2021
140
May, 2022
124
August, 2017
123
May, 2020
119
August, 2021
111
February, 2023
87
November, 2018
84
October, 2019
63
December, 2017
60
May, 2021
44
October, 2018
43
July, 2019
35
December, 2018
31
November, 2019
28
May, 2019
20
April, 2019
18
January, 2019
16
January, 2021
14
March, 2020
14
September, 2018
12
November, 2020
11
May, 2023
11
October, 2017
11
September, 2017
10
April, 2020
8
February, 2018
8
January, 2018
7
August, 2020
March, 2019
5
May, 2024
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2022
1
March, 2023
Available data
18
bam
17
bed narrowPeak
12
bigWig
5
tagAlign
Organism
60
Homo sapiens
Biosample type
27
in vitro differentiated cells
17
primary cell
16
cell line
Organ
18
epithelium
18
pancreas
Project
60
AMP
Genome assembly (visualization)
25
hg19
17
GRCh38
Lab
35
AMP-T2D consortium
25
Kyle Gaulton, UCSD
Audit category:
19
inconsistent ontology term
assay_slims!
Transcription
assay_title!
pCHi-C
month_released!
March, 2019
target.investigated_as!
histone
BIOSAMPLE
ASSAY
60 results
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Clear Filters
ATAC-seq
ChIP-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
5
17
cardiomyocytes
3
pancreatic PP cell
2
primary cell
monocyte
13
1
CD8-positive, alpha-beta T cell
3
cell line
EndoC_BH1
16
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