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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
3
ATAC-seq
1
MPRA
snATAC-seq
Assay category
Transcription
3
DNA accessibility
Date released
84
February, 2021
3
February, 2023
1
October, 2022
Available data
1752
bam
1628
bed narrowPeak
1573
bigWig
972
bigBed narrowPeak
957
fastq
349
tagAlign
313
bed broadPeak
276
bigBed broadPeak
262
bed bed3+
88
txt
80
zippedFastqFolder
64
xls
56
tsv
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
19
hic
12
bed bed3
7
bed bedgraph
4
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
vcf
Organism
87
Homo sapiens
Biosample type
84
tissue
3
in vitro differentiated cells
1
cell line
Organ
84
bone element
Project
88
AMP
Genome assembly (visualization)
3
hg19
Lab
85
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
85
inconsistent ontology term
assay_slims!
Transcription
assay_title!
snATAC-seq
month_released!
October, 2019
September, 2020
BIOSAMPLE
ASSAY
88 results
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RNA microarray
ATAC-seq
MPRA
tissue
bone element
84
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
cell line
MIN6
1
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