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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
4
July, 2019
Available data
1120
bam
1002
bed narrowPeak
928
bigWig
548
bigBed narrowPeak
463
fastq
255
bed bed3+
240
bed broadPeak
218
bigBed broadPeak
209
tagAlign
101
zippedFastqFolder
88
txt
64
xls
47
tsv
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
1
tar
Organism
4
Homo sapiens
Biosample type
4
primary cell
cell line
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
assay_slims!
Transcription
assay_title!
snDrop-seq
biosample_type!
cell line
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
4 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
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