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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
4
ATAC-seq
1
Hi-C
Assay category
25
DNA binding
Transcription
4
DNA accessibility
1
3D chromatin structure
Target of assay
14
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
4
control
3
narrow histone mark
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
151
May, 2020
139
August, 2021
120
May, 2019
119
February, 2021
115
May, 2021
94
December, 2017
93
February, 2023
87
November, 2018
80
April, 2019
74
October, 2018
46
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
40
May, 2024
39
May, 2022
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
12
November, 2020
11
May, 2023
11
September, 2017
5
March, 2019
3
January, 2018
2
December, 2019
1
August, 2018
1
August, 2022
1
October, 2022
Available data
26
bam
26
fastq
21
bed narrowPeak
21
bigBed narrowPeak
21
bigWig
1
bed broadPeak
1
bedpe
1
hic
Organism
30
Homo sapiens
Biosample type
18
cell line
12
tissue
Organ
18
blood
18
bodily fluid
7
spleen
5
pancreas
Project
30
AMP
Genome assembly (visualization)
24
hg19
23
GRCh38
Lab
25
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
assay_slims!
Transcription
assembly!
hg18
BIOSAMPLE
ASSAY
30 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
cell line
GM12878
18
tissue
spleen
7
islet of Langerhans
4
1
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