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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
23
ATAC-seq
17
pCHi-C
1
DNAme array
Assay category
42
DNA binding
23
DNA accessibility
Transcription
1
DNA methylation
Target of assay
24
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
6
control
5
RNA binding protein
Date released
135
August, 2017
125
November, 2017
123
February, 2021
101
May, 2022
94
August, 2021
83
October, 2019
79
May, 2020
76
May, 2021
66
February, 2023
40
May, 2024
31
June, 2019
30
March, 2020
29
October, 2018
23
May, 2019
17
December, 2017
July, 2019
16
January, 2021
16
November, 2018
15
April, 2019
11
May, 2023
10
April, 2020
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
January, 2018
4
January, 2019
4
September, 2017
3
September, 2020
2
December, 2019
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
March, 2023
1
October, 2022
Available data
7
bigWig
7
fastq
1
bam
1
tagAlign
Organism
83
Homo sapiens
Biosample type
38
in vitro differentiated cells
28
primary cell
16
cell line
1
tissue
Organ
24
epithelium
24
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
59
AMP
17
T1D
7
HPAP
Genome assembly (visualization)
hg19
110
GRCh38
Lab
54
Kyle Gaulton, UCSD
22
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
17
inconsistent ontology term
assay_slims!
Transcription
assembly!
hg19
month_released!
July, 2019
BIOSAMPLE
ASSAY
83 results
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ChIP-seq
ATAC-seq
pCHi-C
DNAme array
in vitro differentiated cells
embryonic stem cell
37
pancreatic PP cell
1
primary cell
pancreatic alpha cell
5
monocyte
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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cell line
EndoC_BH1
16
tissue
thymus
1
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