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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
2
WGBS
1
GRO-seq
1
pCHi-C
Assay category
15
DNA binding
2
DNA methylation
Target of assay
14
control
1
histone
1
histone modification
1
narrow histone mark
Date released
5
November, 2018
4
December, 2017
4
December, 2018
3
February, 2018
1
January, 2018
1
January, 2019
1
March, 2020
Available data
18
fastq
17
bam
3
bigWig
2
bed bedMethyl
2
bigBed bedMethyl
1
tsv
Organism
19
Homo sapiens
Biosample type
11
tissue
8
in vitro differentiated cells
Organ
215
pancreas
158
epithelium
135
liver
112
kidney
110
brain
109
heart
89
connective tissue
85
bone element
63
adipose tissue
62
blood vessel
62
vasculature
44
artery
23
limb
20
musculature of body
14
blood
14
bodily fluid
11
lung
11
nerve
11
spleen
8
embryo
8
eye
5
gonad
5
ovary
5
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
19
AMP
Genome assembly (visualization)
31
GRCh38
hg19
1
hg18
Lab
19
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
assay_slims!
Transcription
assembly!
hg19
BIOSAMPLE
ASSAY
19 results
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Clear Filters
ChIP-seq
WGBS
GRO-seq
pCHi-C
tissue
spleen
8
2
1
in vitro differentiated cells
pancreatic endoderm
5
1
Hepatic endoderm
2
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