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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
Assay category
77
DNA binding
Target of assay
77
histone
77
histone modification
41
narrow histone mark
36
broad histone mark
2
transcription factor
1
RNA binding protein
Date released
32
September, 2018
26
August, 2017
10
November, 2019
6
October, 2019
2
May, 2021
1
March, 2020
Available data
77
bam
77
bigWig
65
bed narrowPeak
58
fastq
6
bigBed narrowPeak
1
tagAlign
Organism
77
Homo sapiens
Biosample type
tissue
58
primary cell
18
cell line
1
in vitro differentiated cells
Organ
90
epithelium
77
pancreas
33
connective tissue
33
liver
14
vasculature
13
blood vessel
12
vein
11
embryo
10
kidney
8
musculature of body
3
brain
2
heart
1
blood
1
bodily fluid
1
eye
Project
75
AMP
2
T1D
Genome assembly (visualization)
77
GRCh38
77
hg19
Lab
77
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
Audit category:
44
missing controlled_by
Audit category:
4
inconsistent control read length
assay_slims!
Transcription
biosample_type!
tissue
organ_slims!
artery
BIOSAMPLE
ASSAY
77 results
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ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
pancreatic alpha cell
7
pancreatic beta cell
7
cell line
EndoC_BH1
12
Panc1
6
in vitro differentiated cells
pancreatic PP cell
1
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