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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
8
ATAC-seq
1
pCHi-C
Assay category
Transcription
8
DNA accessibility
Date released
92
February, 2021
1
May, 2021
Available data
84
txt
8
bam
8
bed narrowPeak
bed bed3
Organism
93
Homo sapiens
Biosample type
92
tissue
1
primary cell
Organ
597
liver
463
pancreas
318
epithelium
261
brain
227
heart
227
kidney
197
connective tissue
168
vasculature
162
blood vessel
115
limb
93
bone element
90
adipose tissue
86
musculature of body
83
artery
69
blood
69
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
21
vein
18
ureter
11
lung
8
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
92
AMP
1
T1D
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
92
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
assay_slims!
Transcription
audit.ERROR.category!
audit script error
files.file_type!
bed bed3
month_released!
October, 2022
BIOSAMPLE
ASSAY
93 results
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RNA microarray
ATAC-seq
pCHi-C
tissue
bone element
84
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
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primary cell
megakaryocyte
1
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