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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
3
ChIP-seq
2
RRBS
Assay category
12
DNA accessibility
Transcription
3
DNA binding
2
DNA methylation
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
June, 2019
6
February, 2023
4
May, 2020
3
May, 2019
2
July, 2019
2
October, 2019
May, 2021
Available data
9
bam
6
bigWig
6
tsv
4
bed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed narrowPeak
Organism
17
Homo sapiens
Biosample type
89
tissue
39
cell line
21
in vitro differentiated cells
17
primary cell
1
stem cell
Organ
5
epithelium
4
kidney
1
connective tissue
1
heart
1
liver
Project
17
AMP
Genome assembly (visualization)
10
hg19
4
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
31
audit script error
17
inconsistent ontology term
assay_slims!
Transcription
month_released!
June, 2019
May, 2021
BIOSAMPLE
ASSAY
17 results
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ATAC-seq
ChIP-seq
RRBS
primary cell
gabaergic neuron
3
kidney epithelial cell
3
microglial cell/astrocyte
3
central memory CD8-positive, alpha-beta T cell
2
naive B cel
2
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