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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ATAC-seq
8
ChIP-seq
1
pCHi-C
Assay category
Transcription
18
DNA accessibility
8
DNA binding
Target of assay
5
transcription factor
3
control
Date released
382
November, 2017
234
October, 2019
218
June, 2019
154
August, 2017
120
May, 2019
104
May, 2021
95
May, 2020
93
December, 2017
84
November, 2018
79
April, 2019
74
October, 2018
39
November, 2019
34
August, 2021
34
December, 2018
27
February, 2021
25
January, 2019
24
February, 2018
18
May, 2022
17
July, 2019
14
September, 2018
12
October, 2017
11
September, 2017
3
March, 2020
2
November, 2020
1
March, 2019
Available data
84
txt
33
fastq
27
bam
23
bed narrowPeak
9
tsv
8
tagAlign
6
bigWig
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
27
Homo sapiens
Biosample type
17
cell line
8
tissue
2
primary cell
Organ
14
artery
14
blood vessel
14
heart
14
vasculature
8
bone element
8
skeleton
6
limb
2
connective tissue
1
liver
Project
27
AMP
Genome assembly (visualization)
24
hg19
23
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
1
inconsistent replicate
assay_slims!
Transcription
audit.NOT_COMPLIANT.category!
missing controlled_by
month_released!
January, 2018
BIOSAMPLE
ASSAY
27 results
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ATAC-seq
ChIP-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
8
6
iPSC derived cell line
2
HepG2
1
tissue
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
proximal epiphysis
1
+ See 3 more…
primary cell
osteoblast
1
1
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