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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
10
snATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
Transcription
39
DNA accessibility
Date released
May, 2021
18
February, 2023
18
May, 2022
8
January, 2021
Available data
18
bam
18
bed narrowPeak
18
fastq
Organism
44
Homo sapiens
Biosample type
39
tissue
5
cell line
Organ
39
pancreas
8
blood
bodily fluid
Project
26
T1D
18
AMP
Genome assembly (visualization)
18
hg19
Lab
2245
AMP-T2D consortium
147
Klaus Kaestner, Upenn
82
Katalin Susztak, Upenn
44
Kyle Gaulton, UCSD
40
Patrick T. Ellinor, Broad
28
Bing Ren, UCSD
20
Karen Mohlke, UNC
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
assay_slims!
Transcription
audit.NOT_COMPLIANT.category!
missing controlled_by
month_released!
May, 2021
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
44 results
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ATAC-seq
snATAC-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
tissue
islet of Langerhans
29
6
pancreas
4
cell line
EndoC_BH1
3
2
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