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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
RRBS
12
WGBS
5
ATAC-seq
5
Hi-C
1
FAIRE-seq
Assay category
Transcription
25
DNA methylation
6
DNA accessibility
5
3D chromatin structure
Date released
321
August, 2017
311
November, 2017
217
May, 2021
199
October, 2019
188
June, 2019
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
110
February, 2023
94
December, 2017
92
May, 2019
81
November, 2018
80
April, 2019
74
October, 2018
47
March, 2020
46
September, 2018
41
November, 2019
40
May, 2024
36
July, 2019
35
December, 2018
25
January, 2019
24
February, 2018
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
October, 2017
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
21
bed bedMethyl
21
bigBed bedMethyl
15
bam
15
bigWig
6
bed narrowPeak
1
bed bed3+
1
bigBed narrowPeak
1
hdf5
Organism
36
Homo sapiens
Biosample type
27
tissue
9
primary cell
Organ
14
heart
8
epithelium
brain
7
vasculature
6
blood vessel
6
musculature of body
5
kidney
5
limb
3
liver
2
connective tissue
2
pancreas
1
artery
1
eye
1
pericardium
Project
36
AMP
Genome assembly (visualization)
20
hg19
13
GRCh38
Lab
36
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
Transcription
audit.WARNING.category!
inconsistent control run_type
organ_slims!
brain
BIOSAMPLE
ASSAY
36 results
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RRBS
WGBS
ATAC-seq
Hi-C
FAIRE-seq
tissue
heart left ventricle
1
4
2
gastrocnemius medialis
4
aorta
2
heart right ventricle
2
kidney
1
1
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
endothelial cell of hepatic sinusoid
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
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