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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ATAC-seq
34
ChIP-seq
4
DNase-seq
Assay category
Transcription
49
DNA accessibility
34
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
35
February, 2023
26
October, 2019
14
February, 2021
5
May, 2019
2
June, 2019
1
July, 2019
Available data
74
bed narrowPeak
48
bam
31
bigWig
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
83
Homo sapiens
Biosample type
69
tissue
14
cell line
Organ
598
liver
342
pancreas
262
brain
229
kidney
227
heart
222
epithelium
202
connective tissue
169
vasculature
163
blood vessel
115
limb
96
bone element
90
adipose tissue
87
musculature of body
83
artery
61
blood
61
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
22
vein
18
ureter
12
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
stomach
1
thymus
1
urinary bladder
Project
83
AMP
Genome assembly (visualization)
74
GRCh38
39
hg19
Lab
83
AMP-T2D consortium
assay_slims!
Transcription
files.file_type!
bedpe
organ_slims!
stomach
BIOSAMPLE
ASSAY
83 results
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ATAC-seq
ChIP-seq
DNase-seq
tissue
coronary artery
36
5
2
tibial artery
1
23
2
cell line
smooth muscle cell of the coronary artery
8
6
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