Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ATAC-seq
15
ChIP-seq
6
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
Hi-C
Assay category
Transcription
19
DNA accessibility
15
DNA binding
1
3D chromatin structure
Target of assay
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
5
control
3
nucleotide modification
1
RNA binding protein
1
transcription factor
Date released
17
May, 2021
15
November, 2019
6
February, 2023
6
November, 2020
3
March, 2020
2
August, 2021
Available data
16
bam
15
bigWig
14
bed narrowPeak
1
bedpe bed3+
1
hic
1
tsv
Organism
48
Homo sapiens
Biosample type
49
cell line
Organ
44
epithelium
44
pancreas
Project
42
AMP
7
T1D
Genome assembly (visualization)
17
hg19
14
GRCh38
Lab
38
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
5
Kyle Gaulton, UCSD
Audit category:
43
inconsistent ontology term
assay_slims!
Transcription
BIOSAMPLE
ASSAY
49 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
MeRIP-seq
CRISPR genome editing followed by DNA sequencing
Capture-C
HiChIP
CRISPR genome editing followed by sgRNA sequencing
Hi-C
cell line
EndoC_BH1
19
15
6
3
2
2
1
1
Download