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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
ChIP-seq
29
ATAC-seq
17
pCHi-C
1
DNAme array
Assay category
122
DNA binding
Transcription
29
DNA accessibility
1
DNA methylation
Target of assay
119
histone
119
histone modification
66
broad histone mark
53
narrow histone mark
3
control
Date released
400
November, 2017
August, 2017
231
October, 2019
211
June, 2019
169
May, 2021
151
May, 2020
140
May, 2022
134
February, 2021
104
August, 2021
87
November, 2018
80
April, 2019
74
October, 2018
70
May, 2019
64
February, 2023
51
December, 2017
46
September, 2018
40
March, 2020
40
May, 2024
36
July, 2019
36
November, 2019
35
December, 2018
25
January, 2019
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
7
August, 2020
5
March, 2019
4
January, 2018
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2022
1
March, 2023
Available data
128
bed narrowPeak
118
bigWig
98
bam
84
tagAlign
Organism
169
Homo sapiens
Biosample type
151
primary cell
in vitro differentiated cells
17
cell line
1
tissue
Organ
17
epithelium
17
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
102
T1D
67
AMP
Genome assembly (visualization)
131
hg19
98
GRCh38
Lab
134
Kyle Gaulton, UCSD
35
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
assay_slims!
Transcription
biosample_type!
in vitro differentiated cells
month_released!
August, 2017
organ_slims!
vasculature
BIOSAMPLE
ASSAY
169 results
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Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte
85
13
1
1
CD8-positive, alpha-beta T cell
33
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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cell line
EndoC_BH1
1
16
tissue
thymus
1
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