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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
21
ATAC-seq
8
ChIP-seq
3
snDrop-seq
1
pCHi-C
Assay category
Transcription
21
DNA accessibility
8
DNA binding
Target of assay
5
transcription factor
3
control
Date released
362
November, 2017
197
August, 2017
163
June, 2019
126
August, 2021
120
October, 2019
117
February, 2021
99
February, 2023
87
November, 2018
82
May, 2019
78
December, 2017
63
October, 2018
57
April, 2019
54
May, 2021
45
March, 2020
39
May, 2022
37
November, 2019
35
December, 2018
30
July, 2019
25
May, 2024
24
May, 2020
22
January, 2019
21
October, 2017
16
February, 2018
11
May, 2023
10
April, 2020
10
November, 2020
8
January, 2018
8
January, 2021
6
September, 2017
5
March, 2019
2
December, 2019
1
August, 2018
1
August, 2022
1
October, 2022
Available data
84
txt
25
bam
22
bed narrowPeak
8
tagAlign
5
bigWig
4
bed bedgraph
3
tsv
1
bed bed3
1
bed bed3+
Organism
117
Homo sapiens
Biosample type
95
tissue
primary cell
18
cell line
4
in vitro differentiated cells
Organ
92
bone element
14
artery
14
blood vessel
14
heart
14
vasculature
8
skeleton
6
limb
4
connective tissue
3
kidney
2
liver
Project
117
AMP
Genome assembly (visualization)
27
hg19
22
GRCh38
Lab
117
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
1
inconsistent replicate
assay_slims!
Transcription
biosample_type!
primary cell
month_released!
July, 2018
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
117 results
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RNA microarray
ATAC-seq
ChIP-seq
snDrop-seq
pCHi-C
tissue
bone element
84
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
+ See 7 more…
cell line
smooth muscle cell of the coronary artery
8
6
HepG2
1
1
iPSC derived cell line
2
in vitro differentiated cells
adipocyte
4
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