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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
pCHi-C
3
Hi-C
2
ATAC-seq
1
ChIP-seq
Assay category
Transcription
3
3D chromatin structure
2
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
324
November, 2017
216
May, 2021
127
August, 2017
101
May, 2020
101
May, 2022
66
August, 2021
64
October, 2019
61
November, 2018
55
June, 2019
46
September, 2018
43
December, 2017
43
February, 2021
30
February, 2023
28
December, 2018
24
February, 2018
20
November, 2019
18
January, 2019
14
March, 2020
13
July, 2019
8
January, 2021
8
November, 2020
7
August, 2020
5
January, 2018
5
May, 2019
5
September, 2017
4
October, 2022
3
September, 2020
1
August, 2018
1
March, 2023
Available data
7
tsv
5
bedpe bed3+
3
bigWig
3
hic
2
ibed
1
bam
1
bed narrowPeak
Organism
14
Homo sapiens
Biosample type
tissue
7
cell line
6
in vitro differentiated cells
stem cell
1
primary cell
Organ
4
epithelium
3
pancreas
2
kidney
1
blood vessel
1
mammary gland
1
vasculature
1
vein
Project
13
AMP
1
T1D
Genome assembly (visualization)
8
hg19
1
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
assay_slims!
Transcription
biosample_type!
stem cell
tissue
organ_slims!
artery
BIOSAMPLE
ASSAY
14 results
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Clear Filters
pCHi-C
Hi-C
ATAC-seq
ChIP-seq
cell line
EndoC_BH1
2
1
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
fibroblast cell line
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
lymphocyte of B lineage (iPSC)
1
1
embryonic stem cell
1
primary cell
endothelial cell of umbilical vein
1
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