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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
5
DNase-seq
3
ATAC-seq
1
WGBS
Assay category
57
DNA binding
8
DNA accessibility
Transcription
1
DNA methylation
Target of assay
54
histone
54
histone modification
36
broad histone mark
18
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
39
May, 2019
21
October, 2019
3
July, 2019
3
June, 2019
Available data
100
bed narrowPeak
83
bam
66
bigWig
62
bigBed narrowPeak
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
1
tsv
Organism
66
Homo sapiens
Biosample type
66
tissue
27
primary cell
4
cell line
Organ
193
brain
144
heart
113
liver
102
pancreas
89
kidney
87
limb
66
blood vessel
66
vasculature
53
musculature of body
27
adipose tissue
27
artery
27
connective tissue
27
nerve
18
ureter
16
spleen
3
eye
1
pituitary gland
Project
66
AMP
Genome assembly (visualization)
66
GRCh38
65
hg19
Lab
66
AMP-T2D consortium
assay_slims!
Transcription
files.file_type!
xls
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
DNase-seq
ATAC-seq
WGBS
tissue
tibial artery
18
2
1
ascending aorta
13
1
thoracic aorta
12
1
aorta
11
1
coronary artery
3
2
1
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