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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
107
ChIP-seq
27
DNase-seq
6
WGBS
4
ATAC-seq
Assay category
107
DNA binding
31
DNA accessibility
Transcription
6
DNA methylation
Target of assay
95
histone
95
histone modification
57
broad histone mark
38
narrow histone mark
12
transcription factor
10
RNA binding protein
Date released
47
April, 2019
40
May, 2024
27
June, 2019
15
May, 2019
10
July, 2019
5
October, 2019
Available data
173
bed narrowPeak
144
bigWig
119
bam
88
bigBed narrowPeak
27
bed bed3+
27
bed broadPeak
27
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
3
bedpe bed3+
3
hic
3
tsv
Organism
144
Homo sapiens
Biosample type
144
tissue
6
primary cell
4
cell line
Organ
193
brain
144
heart
102
pancreas
89
kidney
87
limb
86
liver
66
blood vessel
66
vasculature
53
musculature of body
27
adipose tissue
27
artery
27
connective tissue
27
nerve
18
ureter
16
spleen
3
eye
1
pituitary gland
Project
144
AMP
Genome assembly (visualization)
143
GRCh38
96
hg19
Lab
104
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
assay_slims!
Transcription
month_released!
May, 2020
BIOSAMPLE
ASSAY
144 results
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ChIP-seq
DNase-seq
WGBS
ATAC-seq
tissue
left cardiac atrium
40
1
heart left ventricle
29
3
2
2
heart
12
18
1
heart right ventricle
11
1
2
right atrium auricular region
7
2
1
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