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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
ChIP-seq
15
ATAC-seq
4
DNase-seq
4
pCHi-C
1
Hi-C
Assay category
195
DNA binding
Transcription
19
DNA accessibility
1
3D chromatin structure
Target of assay
168
histone
168
histone modification
129
narrow histone mark
39
broad histone mark
27
control
Date released
219
October, 2019
162
June, 2019
138
August, 2017
115
May, 2019
95
February, 2021
82
November, 2017
80
April, 2019
80
February, 2023
72
August, 2021
51
October, 2018
50
May, 2020
48
December, 2017
40
May, 2024
39
May, 2022
30
July, 2019
30
March, 2020
25
November, 2018
22
October, 2017
20
November, 2019
11
May, 2023
10
April, 2020
8
January, 2021
7
December, 2018
7
January, 2019
6
September, 2017
5
March, 2019
4
November, 2020
2
December, 2019
1
August, 2022
1
January, 2018
1
May, 2021
Available data
178
bam
151
bed narrowPeak
151
bigWig
49
tagAlign
46
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
219
Homo sapiens
Biosample type
219
tissue
32
primary cell
26
cell line
6
in vitro differentiated cells
Organ
85
brain
65
limb
38
nerve
26
artery
26
blood vessel
26
vasculature
7
eye
6
heart
5
liver
4
gonad
4
kidney
4
ovary
3
pancreas
2
connective tissue
2
pituitary gland
adipose tissue
1
lymph node
1
skin of body
Project
219
AMP
Genome assembly (visualization)
154
hg19
153
GRCh38
Lab
219
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
Transcription
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
219 results
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ChIP-seq
ATAC-seq
DNase-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
21
13
4
tibial nerve
35
1
2
tibial artery
23
1
2
heart
5
1
brain
5
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