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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
5
ChIP-seq
5
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
7
October, 2019
3
June, 2019
1
July, 2019
March, 2020
1
May, 2021
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
39
Homo sapiens
Biosample type
35
tissue
4
primary cell
Organ
583
liver
429
pancreas
298
epithelium
225
brain
192
heart
174
connective tissue
153
vasculature
149
blood vessel
149
kidney
97
bone element
83
adipose tissue
79
artery
79
limb
69
blood
69
bodily fluid
50
musculature of body
38
eye
36
nerve
23
spleen
20
embryo
19
vein
12
skeleton
10
lung
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
38
AMP
1
T1D
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
38
AMP-T2D consortium
1
Kyle Gaulton, UCSD
assay_slims!
Transcription
files.file_type!
bed bed3+
month_released!
March, 2020
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ATAC-seq
ChIP-seq
pCHi-C
RRBS
tissue
retina
15
pigmented layer of retina
12
islet of Langerhans
1
2
4
thymus
1
primary cell
retinal pigment epithelial cell
3
1
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