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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
5
ChIP-seq
4
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
7
October, 2019
3
June, 2019
1
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
38
Homo sapiens
Biosample type
34
tissue
4
primary cell
Organ
585
liver
438
pancreas
302
epithelium
brain
197
heart
176
connective tissue
156
vasculature
152
blood vessel
151
kidney
97
bone element
84
adipose tissue
79
artery
79
limb
69
blood
69
bodily fluid
53
musculature of body
38
eye
36
nerve
24
spleen
20
embryo
20
vein
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
38
AMP
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
38
AMP-T2D consortium
assay_slims!
Transcription
files.file_type!
bed bed3+
organ_slims!
brain
BIOSAMPLE
ASSAY
38 results
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Clear Filters
ATAC-seq
ChIP-seq
pCHi-C
RRBS
tissue
retina
15
pigmented layer of retina
12
islet of Langerhans
1
2
4
primary cell
retinal pigment epithelial cell
3
1
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