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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
5
ChIP-seq
4
pCHi-C
1
RRBS
Assay category
29
DNA accessibility
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
8
October, 2019
3
June, 2019
1
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
39
Homo sapiens
Biosample type
35
tissue
4
primary cell
Organ
535
liver
446
pancreas
301
epithelium
215
brain
197
heart
193
connective tissue
152
vasculature
151
kidney
150
blood vessel
97
bone element
87
adipose tissue
79
artery
79
limb
69
blood
69
bodily fluid
41
musculature of body
38
eye
36
nerve
24
spleen
23
embryo
18
vein
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
39
AMP
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
39
AMP-T2D consortium
assay_slims!
Transcription
files.file_type!
bed broadPeak
organ_slims!
skeleton
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ATAC-seq
ChIP-seq
pCHi-C
RRBS
tissue
retina
15
pigmented layer of retina
12
islet of Langerhans
2
2
4
primary cell
retinal pigment epithelial cell
3
1
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