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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
55
DNA binding
10
DNA accessibility
Transcription
Target of assay
52
transcription factor
19
RNA binding protein
16
recombinant protein
5
chromatin remodeller
3
control
3
other context
3
other post-translational modification
Date released
406
November, 2017
316
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
80
April, 2019
74
October, 2018
65
November, 2018
49
March, 2020
46
September, 2018
41
November, 2019
40
May, 2024
24
February, 2018
23
October, 2017
20
July, 2019
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
7
January, 2019
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
72
bam
72
fastq
68
bigWig
61
bed narrowPeak
61
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
bigBed bedMethyl
Organism
65
Homo sapiens
Biosample type
45
cell line
20
tissue
Organ
52
liver
15
blood
bodily fluid
7
spleen
3
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
65
AMP
Genome assembly (visualization)
60
GRCh38
59
hg19
Lab
65
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_slims!
Transcription
files.file_type!
bigBed bedMethyl
month_released!
April, 2018
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
DNase-seq
FAIRE-seq
cell line
HepG2
45
tissue
spleen
6
1
liver
4
2
body of pancreas
2
brain
2
omental fat pad
1
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