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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ATAC-seq
66
ChIP-seq
1
pCHi-C
Assay category
Transcription
100
DNA accessibility
66
DNA binding
Target of assay
41
histone
41
histone modification
33
narrow histone mark
25
control
8
broad histone mark
Date released
284
October, 2019
218
June, 2019
217
May, 2021
151
May, 2020
139
August, 2021
124
August, 2017
122
May, 2022
120
May, 2019
119
February, 2021
111
February, 2023
82
November, 2017
80
April, 2019
49
March, 2020
43
July, 2019
41
November, 2019
40
May, 2024
16
January, 2021
16
October, 2018
12
November, 2020
11
May, 2023
10
April, 2020
6
October, 2017
4
March, 2019
4
October, 2022
3
January, 2018
2
December, 2019
1
August, 2022
1
March, 2023
Available data
169
bam
117
bigWig
72
bed narrowPeak
fastq
50
tagAlign
45
bigBed narrowPeak
1
tsv
Organism
167
Homo sapiens
Biosample type
100
primary cell
66
tissue
1
cell line
Organ
51
liver
16
pancreas
Project
167
AMP
Genome assembly (visualization)
86
hg19
33
GRCh38
Lab
167
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_slims!
Transcription
files.file_type!
fastq
BIOSAMPLE
ASSAY
167 results
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ATAC-seq
ChIP-seq
pCHi-C
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 23 more…
tissue
liver
50
endocrine pancreas
16
cell line
HepG2
1
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