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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ATAC-seq
28
ChIP-seq
4
DNase-seq
Assay category
Transcription
49
DNA accessibility
28
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
26
October, 2019
8
February, 2021
5
May, 2019
2
June, 2019
1
July, 2019
Available data
74
bed narrowPeak
48
bam
31
bigWig
25
bigBed narrowPeak
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
77
Homo sapiens
Biosample type
69
tissue
8
cell line
Organ
448
pancreas
430
liver
316
epithelium
222
kidney
221
heart
181
connective tissue
163
vasculature
157
blood vessel
144
brain
115
limb
97
bone element
82
adipose tissue
77
artery
72
musculature of body
69
blood
69
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
22
vein
18
ureter
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
77
AMP
Genome assembly (visualization)
70
GRCh38
35
hg19
Lab
77
AMP-T2D consortium
assay_slims!
Transcription
files.file_type!
tagAlign
organ_slims!
thymus
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
77 results
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ATAC-seq
ChIP-seq
DNase-seq
tissue
coronary artery
36
5
2
tibial artery
1
23
2
cell line
smooth muscle cell of the coronary artery
8
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