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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
Assay category
24
DNA binding
Target of assay
303
control
32
transcription factor
24
histone
24
histone modification
13
narrow histone mark
11
broad histone mark
4
RNA binding protein
1
recombinant protein
Date released
15
August, 2017
6
October, 2019
2
November, 2017
1
December, 2017
Available data
717
bigWig
701
bam
bed narrowPeak
391
bigBed narrowPeak
237
tagAlign
230
fastq
65
bed broadPeak
30
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
24
Homo sapiens
Biosample type
17
primary cell
3
cell line
3
tissue
1
in vitro differentiated cells
Organ
16
pancreas
5
blood vessel
5
epithelium
5
vasculature
5
vein
2
liver
1
embryo
Project
24
AMP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
24
AMP-T2D consortium
Audit category:
16
missing controlled_by
Audit category:
2
inconsistent control read length
assay_slims!
Transcription
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
24 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
12
endothelial cell of umbilical vein
5
cell line
HepG2
2
Panc1
1
tissue
islet of Langerhans
3
in vitro differentiated cells
pancreatic endoderm
1
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