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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
15
ChIP-seq
1
snATAC-seq
Assay category
34
DNA accessibility
15
DNA binding
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
2
control
Date released
33
June, 2019
15
August, 2017
1
May, 2022
Available data
62
bigWig
60
bed narrowPeak
51
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
tsv
1
txt
0
bed bed3
Organism
49
Homo sapiens
Biosample type
48
tissue
1
primary cell
Organ
154
brain
97
liver
78
kidney
55
connective tissue
49
musculature of body
48
pancreas
36
heart
36
limb
25
epithelium
19
vasculature
18
ureter
17
blood vessel
14
adipose tissue
10
artery
4
bone element
4
eye
4
skeleton
3
embryo
2
nerve
2
vein
1
pituitary gland
1
spleen
Project
49
AMP
Genome assembly (visualization)
47
hg19
33
GRCh38
Lab
49
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
assay_slims!
Transcription
BIOSAMPLE
ASSAY
49 results
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DNase-seq
ChIP-seq
snATAC-seq
tissue
muscle of arm
17
skeletal muscle tissue
15
1
muscle of leg
13
forelimb muscle
1
hindlimb muscle
1
primary cell
skeletal muscle cell
1
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