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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
239
ChIP-seq
Assay category
239
DNA binding
Target of assay
236
transcription factor
histone
74
histone modification
66
recombinant protein
45
broad histone mark
35
RNA binding protein
29
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
239
November, 2017
191
June, 2019
87
August, 2021
73
November, 2018
65
February, 2023
42
December, 2017
38
May, 2022
35
August, 2017
30
December, 2018
27
November, 2019
23
February, 2021
22
October, 2019
17
May, 2021
15
October, 2018
14
January, 2019
14
September, 2018
7
July, 2019
6
October, 2017
5
April, 2019
5
May, 2019
5
May, 2024
5
September, 2017
2
November, 2020
Available data
317
bam
306
fastq
259
bigWig
239
bed narrowPeak
239
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
11
tagAlign
3
tar
Organism
239
Homo sapiens
Biosample type
236
cell line
3
primary cell
Organ
236
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
239
AMP
Genome assembly (visualization)
237
hg19
207
GRCh38
Lab
239
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
assay_slims!
Transcription
month_released!
March, 2019
target.investigated_as!
histone
BIOSAMPLE
ASSAY
239 results
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Clear Filters
ChIP-seq
cell line
HepG2
236
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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