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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
3
Hi-C
Assay category
6
DNA binding
3
3D chromatin structure
Target of assay
4
transcription factor
2
control
Date released
6
February, 2021
2
March, 2020
1
October, 2019
Available data
129
bed narrowPeak
122
bam
92
bigWig
79
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
1
tsv
Organism
9
Homo sapiens
Biosample type
6
cell line
2
primary cell
1
tissue
Organ
118
brain
88
liver
26
pancreas
22
connective tissue
17
musculature of body
13
epithelium
9
blood vessel
9
heart
9
vasculature
8
adipose tissue
6
artery
2
vein
1
kidney
1
pituitary gland
Project
9
AMP
Genome assembly (visualization)
7
hg19
4
GRCh38
Lab
9
AMP-T2D consortium
Audit category:
1
audit script error
assay_slims!
Transcription
organ_slims!
ovary
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
Hi-C
cell line
smooth muscle cell of the coronary artery
6
primary cell
endothelial cell of umbilical vein
2
tissue
aorta
1
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