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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 84RNA microarray
  • 3ATAC-seq
  • 1MPRA
  • 1snATAC-seq
Assay category
  • Transcription
  • 4DNA accessibility
Date released
  • 84February, 2021
  • 3February, 2023
  • 1May, 2022
  • 1October, 2022
Available data
  • 1986bam
  • 1817bed narrowPeak
  • 1767bigWig
  • 1042bigBed narrowPeak
  • 987fastq
  • 398tagAlign
  • 322bed broadPeak
  • 285bigBed broadPeak
  • 271bed bed3+
  • 101zippedFastqFolder
  • 89txt
  • 64xls
  • 56tsv
  • 36bed bedMethyl
  • 36bigBed bedMethyl
  • 23bedpe bed3+
  • 23hic
  • 12bed bed3
  • 7bed bedgraph
  • 5hdf5
  • 4tar
  • 3cool
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 88Homo sapiens
Biosample type
  • 85tissue
  • 3in vitro differentiated cells
  • 1cell line
Organ
  • 84bone element
  • 1musculature of body
Project
  • 89AMP
Genome assembly (visualization)
  • 4hg19
Lab
  • 86AMP-T2D consortium
  • 3Struan F.A. Grant, CHOP
Audit category:
  • 85inconsistent ontology term
  • 1audit script error
assay_slims!
  • Transcription
BIOSAMPLE
ASSAY

89 results

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RNA microarray
ATAC-seq
MPRA
snATAC-seq
tissue
bone element84
skeletal muscle tissue1
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)1
embryonic stem cell1
neuron cell of Hypothalamus (neuron)1
cell line
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