Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
DNase-seq
28
ChIP-seq
Assay category
109
DNA accessibility
28
DNA binding
Target of assay
18
histone
18
histone modification
10
narrow histone mark
8
broad histone mark
7
control
3
RNA binding protein
3
transcription factor
Date released
406
November, 2017
315
August, 2017
260
October, 2019
217
May, 2021
151
May, 2020
149
February, 2021
140
May, 2022
137
June, 2019
115
May, 2019
110
February, 2023
94
December, 2017
87
November, 2018
74
October, 2018
65
August, 2021
57
April, 2019
47
March, 2020
46
September, 2018
41
November, 2019
40
May, 2024
38
July, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
September, 2017
9
April, 2020
8
January, 2018
7
August, 2020
4
March, 2019
3
October, 2022
3
September, 2020
1
August, 2018
1
August, 2022
1
March, 2023
Available data
137
bam
130
bed narrowPeak
130
bigBed narrowPeak
130
bigWig
109
bed bed3+
109
bed broadPeak
109
bigBed broadPeak
Organism
137
Homo sapiens
Biosample type
95
tissue
42
primary cell
Organ
kidney
43
musculature of body
35
heart
32
limb
30
brain
20
epithelium
18
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
4
pancreas
2
artery
2
liver
1
adipose tissue
Project
137
AMP
Genome assembly (visualization)
130
GRCh38
114
hg19
Lab
137
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
assay_slims!
Transcription
lab.title!
Maike Sander, UCSD
organ_slims!
kidney
BIOSAMPLE
ASSAY
137 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
muscle of leg
13
brain
12
heart left ventricle
3
+ See 25 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
retinal pigment epithelial cell
1
3
+ See 9 more…
See all biosamples
Download