Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
5
ATAC-seq
2
WGBS
2
pCHi-C
1
DNase-seq
1
RRBS
Assay category
20
DNA binding
6
DNA accessibility
Transcription
3
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
February, 2021
9
November, 2018
7
December, 2018
7
January, 2019
4
February, 2023
1
July, 2019
1
March, 2020
1
May, 2021
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
4
bed bed3
3
bed bedMethyl
3
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
31
Homo sapiens
Biosample type
30
tissue
1
primary cell
Organ
596
liver
461
pancreas
317
epithelium
262
brain
226
kidney
213
heart
197
connective tissue
155
vasculature
149
blood vessel
109
limb
90
adipose tissue
87
musculature of body
69
artery
69
blood
69
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
22
vein
18
ureter
11
lung
5
bone element
5
gonad
5
ovary
4
skeleton
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
30
AMP
1
T1D
Genome assembly (visualization)
19
hg19
16
GRCh38
Lab
30
AMP-T2D consortium
1
Kyle Gaulton, UCSD
assay_slims!
Transcription
month_released!
February, 2021
BIOSAMPLE
ASSAY
31 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
WGBS
pCHi-C
DNase-seq
RRBS
tissue
spleen
20
1
2
1
1
acetabular part of hip bone
1
ilium
1
ischium
1
pericardium
1
+ See 1 more…
primary cell
megakaryocyte
1
See all biosamples
Download