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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ATAC-seq
34
ChIP-seq
4
DNase-seq
Assay category
Transcription
48
DNA accessibility
34
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
35
February, 2023
26
October, 2019
14
February, 2021
5
May, 2019
2
June, 2019
July, 2019
Available data
73
bed narrowPeak
47
bam
30
bigWig
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
82
Homo sapiens
Biosample type
68
tissue
14
cell line
Organ
595
liver
465
pancreas
315
epithelium
255
brain
213
heart
213
kidney
201
connective tissue
162
vasculature
157
blood vessel
110
limb
97
bone element
90
adipose tissue
82
artery
81
musculature of body
69
blood
69
bodily fluid
41
eye
nerve
25
spleen
23
embryo
22
vein
18
ureter
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
82
AMP
Genome assembly (visualization)
73
GRCh38
38
hg19
Lab
82
AMP-T2D consortium
assay_slims!
Transcription
month_released!
July, 2019
May, 2023
organ_slims!
nerve
BIOSAMPLE
ASSAY
82 results
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ATAC-seq
ChIP-seq
DNase-seq
tissue
coronary artery
35
5
2
tibial artery
1
23
2
cell line
smooth muscle cell of the coronary artery
8
6
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