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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ATAC-seq
28
ChIP-seq
4
DNase-seq
Assay category
Transcription
49
DNA accessibility
28
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
35
February, 2023
22
October, 2019
14
February, 2021
3
May, 2019
2
June, 2019
1
July, 2019
Available data
68
bed narrowPeak
42
bam
25
bigWig
19
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
77
Homo sapiens
Biosample type
63
tissue
14
cell line
Organ
514
liver
394
pancreas
274
epithelium
214
kidney
187
heart
170
connective tissue
145
brain
143
vasculature
138
blood vessel
100
limb
97
bone element
78
adipose tissue
77
artery
74
musculature of body
68
blood
68
bodily fluid
39
eye
30
nerve
23
spleen
18
ureter
16
vein
15
embryo
12
skeleton
11
lung
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
77
AMP
Genome assembly (visualization)
68
GRCh38
33
hg19
Lab
77
AMP-T2D consortium
assay_slims!
Transcription
month_released!
May, 2020
organ_slims!
esophagus
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
77 results
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ATAC-seq
ChIP-seq
DNase-seq
tissue
coronary artery
36
3
2
tibial artery
1
19
2
cell line
smooth muscle cell of the coronary artery
8
6
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