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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
7
ATAC-seq
Assay category
62
DNA binding
7
DNA accessibility
Target of assay
92
histone
92
histone modification
broad histone mark
34
narrow histone mark
23
control
5
RNA binding protein
5
transcription factor
Date released
356
November, 2017
229
October, 2019
213
August, 2017
210
June, 2019
152
February, 2021
151
May, 2020
141
May, 2021
140
May, 2022
130
August, 2021
111
February, 2023
87
November, 2018
67
December, 2017
62
May, 2019
55
October, 2018
49
March, 2020
43
April, 2019
43
July, 2019
35
December, 2018
35
November, 2019
29
September, 2018
21
January, 2019
20
May, 2024
16
January, 2021
13
October, 2017
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
10
February, 2018
7
August, 2020
7
January, 2018
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
62
bam
46
bigWig
39
bed narrowPeak
39
bigBed narrowPeak
7
fastq
Organism
69
Homo sapiens
Biosample type
59
tissue
10
primary cell
Organ
28
blood vessel
28
vasculature
14
heart
13
brain
10
epithelium
9
pancreas
5
artery
3
kidney
3
limb
3
musculature of body
Project
62
AMP
7
HPAP
Genome assembly (visualization)
45
GRCh38
39
hg19
Lab
62
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
3
inconsistent ontology term
assay_slims!
Transcription
organ_slims!
embryo
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
69 results
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ChIP-seq
ATAC-seq
tissue
thoracic aorta
9
ascending aorta
8
temporal lobe
7
angular gyrus
6
aorta
6
+ See 6 more…
primary cell
pancreatic alpha cell
5
kidney epithelial cell
3
pancreatic beta cell
2
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