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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
1
Hi-C
1
RRBS
1
WGBS
Assay category
63
DNA binding
Transcription
2
DNA methylation
1
3D chromatin structure
Target of assay
33
transcription factor
17
histone
17
histone modification
13
control
10
broad histone mark
7
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
315
November, 2017
63
December, 2017
54
August, 2017
53
November, 2018
51
May, 2020
26
August, 2021
20
May, 2022
6
October, 2019
3
July, 2019
2
February, 2021
2
June, 2019
2
March, 2020
December, 2018
Available data
63
bam
63
fastq
51
bigWig
50
bed narrowPeak
50
bigBed narrowPeak
1
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
Organism
66
Homo sapiens
Biosample type
49
tissue
15
in vitro differentiated cells
2
primary cell
Organ
66
liver
27
epithelium
14
heart
13
embryo
7
brain
7
vasculature
6
blood vessel
6
musculature of body
5
kidney
5
limb
2
connective tissue
2
pancreas
1
artery
1
eye
1
pericardium
Project
66
AMP
Genome assembly (visualization)
52
hg19
50
GRCh38
Lab
66
AMP-T2D consortium
Audit category:
27
inconsistent control
assay_slims!
Transcription
month_released!
December, 2018
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
Hi-C
RRBS
WGBS
tissue
liver
38
right lobe of liver
10
1
in vitro differentiated cells
hepatocyte
15
primary cell
endothelial cell of hepatic sinusoid
1
hepatocyte
1
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