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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
1
Hi-C
1
pCHi-C
Assay category
63
DNA binding
1
3D chromatin structure
Transcription
Target of assay
33
transcription factor
17
histone
17
histone modification
13
control
10
broad histone mark
7
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
315
November, 2017
63
December, 2017
54
August, 2017
53
November, 2018
51
May, 2020
26
August, 2021
20
May, 2022
6
October, 2019
3
July, 2019
2
February, 2021
2
June, 2019
2
March, 2020
1
December, 2018
Available data
63
bam
63
fastq
50
bed narrowPeak
50
bigBed narrowPeak
50
bigWig
1
bedpe bed3+
1
hic
1
tsv
Organism
65
Homo sapiens
Biosample type
50
tissue
15
in vitro differentiated cells
Organ
65
liver
23
epithelium
13
embryo
9
pancreas
5
heart
3
blood vessel
3
musculature of body
3
vasculature
2
brain
2
connective tissue
2
intestine
2
kidney
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
thymus
1
urinary bladder
1
vein
Project
65
AMP
Genome assembly (visualization)
51
hg19
50
GRCh38
Lab
65
AMP-T2D consortium
Audit category:
27
inconsistent control
assay_slims!
Transcription
organ_slims!
thymus
BIOSAMPLE
ASSAY
65 results
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Clear Filters
ChIP-seq
Hi-C
pCHi-C
tissue
liver
38
1
1
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
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